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TpnC47D Troponin C at 47D [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36195, updated on 18-Sep-2024

Summary

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Official Symbol
TpnC47Dprovided by FlyBase
Official Full Name
Troponin C at 47Dprovided by FlyBase
Primary source
FLYBASE:FBgn0010423
Locus tag
Dmel_CG9073
See related
AllianceGenome:FB:FBgn0010423
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:RE34610; CG9073; Dmel\CG9073; DmTnC2; DmTpnC47D; DmTpnCIb; TnC; TNC; Tnc3; TnC47D; TNC47D; TpnC Ib; TPnC47D; TpnCIb
Summary
Predicted to enable calcium ion binding activity and enzyme regulator activity. Is expressed in adult head; adult heart; and organism. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See TpnC47D in Genome Data Viewer
Location:
47E5-47E5; 2-64 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (11273845..11275286, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (7161350..7162791, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Cuticular protein 47Ee Neighboring gene Cuticular protein 47Ef Neighboring gene Cuticular protein 47Eg Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Drosophila melanogaster genes encoding three troponin-C isoforms and a calmodulin-related protein. Fyrberg C, et al. Biochem Genet, 1994 Apr. PMID 7980384
  2. Expression patterns of the whole troponin C gene repertoire during Drosophila development. Herranz R, et al. Gene Expr Patterns, 2004 Mar. PMID 15161098
  3. Troponin C in different insect muscle types: identification of two isoforms in Lethocerus, Drosophila and Anopheles that are specific to asynchronous flight muscle in the adult insect. Qiu F, et al. Biochem J, 2003 May 1. PMID 12558500, Free PMC Article
  4. Phylogenetic relationship of muscle tissues deduced from superimposition of gene trees. OOta S, et al. Mol Biol Evol, 1999 Jun. PMID 10368962
  5. Noncanonical roles for Tropomyosin during myogenesis. Williams J, et al. Development, 2015 Oct 1. PMID 26293307

See all (55) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables calcium ion binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables enzyme regulator activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
troponin C at 47D
Names
CG9073-PA
CG9073-PB
TpnC47D-PA
TpnC47D-PB
troponin C

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    11273845..11275286 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299381.1 → NP_001286310.1  troponin C at 47D, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286310.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A8E6H7, P47948, Q8IGT2, Q9V5V9
    UniProtKB/TrEMBL
    A0A0B4LF64
    Conserved Domains (1) summary
    COG5126
    Location:8 → 155
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  2. NM_057620.6 → NP_476968.1  troponin C at 47D, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_476968.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A8E6H7, P47948, Q8IGT2, Q9V5V9
    UniProtKB/TrEMBL
    A0A0B4LF64
    Related
    FBpp0087280
    Conserved Domains (1) summary
    COG5126
    Location:8 → 155
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4LF64 A0A0B4LF64
P47948.2 P47948

Gene LinkOut

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