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ADF1 Adf1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 3289591, updated on 2-Nov-2024

Summary

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Official Symbol
ADF1
Official Full Name
Adf1p
Primary source
SGD:S000028518
Locus tag
YCL058W-A
See related
AllianceGenome:SGD:S000028518; FungiDB:YCL058W-A; VEuPathDB:YCL058W-A
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II and pheromone-dependent signal transduction involved in conjugation with cellular fusion. Located in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ADF1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_001135.5 (23584..23925)

Chromosome III - NC_001135.5Genomic Context describing neighboring genes Neighboring gene chromatin-modulating protein MRC1 Neighboring gene ribosome biosynthesis protein KRR1 Neighboring gene Fyv5p Neighboring gene Mic10p Neighboring gene metalloendopeptidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001135.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A de novo originated gene depresses budding yeast mating pathway and is repressed by the protein encoded by its antisense strand. Li D, et al. Cell Res, 2010 Apr. PMID 20195295
  2. Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii. Brachat S, et al. Genome Biol, 2003. PMID 12844361, Free PMC Article
  3. Enrichment-Based Proteogenomics Identifies Microproteins, Missing Proteins, and Novel smORFs in Saccharomyces cerevisiae. He C, et al. J Proteome Res, 2018 Jul 6. PMID 29897761
  4. The complete DNA sequence of yeast chromosome III. Oliver SG, et al. Nature, 1992 May 7. PMID 1574125
  5. A novel translational control mechanism involving RNA structures within coding sequences. Jungfleisch J, et al. Genome Res, 2017 Jan. PMID 27821408, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in pheromone-dependent signal transduction involved in conjugation with cellular fusion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Adf1p
NP_001018031.2
  • Transcriptional repressor encoded by the FYV5 antisense strand; negatively regulates transcription of FYV5 by binding to the promoter on the sense strand

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001135.5 Reference assembly

    Range
    23584..23925
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001184528.1 → NP_001018031.2  TPA: Adf1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_001018031.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VQV8, Q2V2Q1
    UniProtKB/TrEMBL
    C7GT13, C8Z432, G2W9W9, N1P6A2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2V2Q1.4

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials