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IGKJ2 immunoglobulin kappa joining 2 [ Homo sapiens (human) ]

Gene ID: 28949, updated on 17-Sep-2024

Summary

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Official Symbol
IGKJ2provided by HGNC
Official Full Name
immunoglobulin kappa joining 2provided by HGNC
Primary source
HGNC:HGNC:5720
See related
Ensembl:ENSG00000211596 IMGT/GENE-DB:IGKJ2; AllianceGenome:HGNC:5720
Gene type
other
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
J2
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See IGKJ2 in Genome Data Viewer
Location:
2p11.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (88861525..88861563, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (88870533..88870571, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (89161037..89161075, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene immunoglobulin kappa variable 4-1 Neighboring gene immunoglobulin kappa joining 4 Neighboring gene immunoglobulin kappa joining 3 Neighboring gene immunoglobulin kappa joining 1 Neighboring gene immunoglobulin kappa locus

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A conserved sequence in the immunoglobulin J kappa-C kappa intron: possible enhancer element. Emorine L, et al. Nature, 1983 Aug 4-10. PMID 6308460
  2. Evolution of human immunoglobulin kappa J region genes. Hieter PA, et al. J Biol Chem, 1982 Feb 10. PMID 6276389
  3. Cloned human and mouse kappa immunoglobulin constant and J region genes conserve homology in functional segments. Hieter PA, et al. Cell, 1980 Nov. PMID 6775818

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_000834.1 

    Range
    480138..480176
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    88861525..88861563 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    88870533..88870571 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials