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IGKV1D-8 immunoglobulin kappa variable 1D-8 [ Homo sapiens (human) ]

Gene ID: 28904, updated on 2-Nov-2024

Summary

Official Symbol
IGKV1D-8provided by HGNC
Official Full Name
immunoglobulin kappa variable 1D-8provided by HGNC
Primary source
HGNC:HGNC:5759
See related
Ensembl:ENSG00000239819 IMGT/GENE-DB:IGKV1D-8; AllianceGenome:HGNC:5759
Gene type
other
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
L24; L24a; IGKV1D8
Summary
Predicted to be involved in immune response. Predicted to be located in extracellular region and plasma membrane. Predicted to be part of immunoglobulin complex. Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Nov 2024]
Annotation information
Annotation category: partial on reference assembly
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Genomic context

See IGKV1D-8 in Genome Data Viewer
Location:
2p11.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (90220908..90221382)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (90776485..90776959)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (90259774..90260248)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene immunoglobulin kappa locus Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:90527913-90528424 Neighboring gene immunoglobulin kappa variable 1D-42 (non-functional) Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:90519311-90519810 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:90518809-90519310 Neighboring gene immunoglobulin kappa variable 1D-43 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90485521-90486290 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90484749-90485520 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90482237-90483224 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90481250-90482236 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90480262-90481249 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90476879-90477408 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90475288-90476036 Neighboring gene uncharacterized LOC101926946 Neighboring gene immunoglobulin kappa variable 3D-7

Genomic regions, transcripts, and products

General gene information

Other Names

  • immunoglobulin light chain variable region

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in adaptive immune response IEA
Inferred from Electronic Annotation
more info
 
involved_in immune response IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of immunoglobulin complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of immunoglobulin complex IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_000833.2 

    Range
    27418..27892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    90220908..90221382
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    90776485..90776959
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)