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LOC25498501 probable WRKY transcription factor 49 [ Medicago truncatula (barrel medic) ]

Gene ID: 25498501, updated on 7-Dec-2023

Summary

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Gene symbol
LOC25498501
Gene description
probable WRKY transcription factor 49
Locus tag
MtrunA17_Chr7g0238921
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC25498501 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 7 NC_053048.1 (29045506..29048148, complement)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 7 NC_016413.2 (22583668..22586383, complement)

Chromosome 7 - NC_053048.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At5g02240 Neighboring gene uncharacterized LOC25498498 Neighboring gene laccase-17 Neighboring gene protein FAR-RED ELONGATED HYPOCOTYL 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable WRKY transcription factor 49
Names
WRKY family transcription factor
putative transcription factor WRKY family

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053048.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    29045506..29048148 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013593426.3 → XP_013448880.1  probable WRKY transcription factor 49

    UniProtKB/TrEMBL
    A0A072TZR7
    Conserved Domains (1) summary
    pfam03106
    Location:125 → 180
    WRKY; WRKY DNA -binding domain
Nucleotide Protein
Heading Accession and Version

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