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LOC25490322 WUSCHEL-related homeobox 8 [ Medicago truncatula (barrel medic) ]

Gene ID: 25490322, updated on 7-Dec-2023

Summary

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Gene symbol
LOC25490322
Gene description
WUSCHEL-related homeobox 8
Locus tag
MtrunA17_Chr3g0144021
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC25490322 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 3 NC_053044.1 (57516220..57518777)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 3 NC_016409.2 (54113767..54116312)

Chromosome 3 - NC_053044.1Genomic Context describing neighboring genes Neighboring gene HMG1/2-like protein Neighboring gene putative 12-oxophytodienoate reductase 11 Neighboring gene uncharacterized LOC25490323 Neighboring gene epidermal growth factor receptor substrate 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression dynamics of the Medicago truncatula transcriptome during the symbiotic interaction with Sinorhizobium meliloti: which role for nitric oxide? Boscari A, et al. Plant Physiol, 2013 Jan. PMID 23136381, Free PMC Article
  2. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WUSCHEL-related homeobox 8
Names
putative transcription factor Homobox-WOX family
wuschel-related homeobox protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053044.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    57516220..57518777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013606844.3 → XP_013462298.1  WUSCHEL-related homeobox 8

    UniProtKB/TrEMBL
    A0A072V4R9
    Conserved Domains (1) summary
    pfam00046
    Location:82 → 139
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases