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LOC25488459 protein FAR1-RELATED SEQUENCE 2 [ Medicago truncatula (barrel medic) ]

Gene ID: 25488459, updated on 22-Apr-2023

Summary

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Gene symbol
LOC25488459
Gene description
protein FAR1-RELATED SEQUENCE 2
Locus tag
MtrunA17_Chr3g0078041
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC25488459 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 3 NC_053044.1 (678686..688725)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 3 NC_016409.2 (658973..663897)

Chromosome 3 - NC_053044.1Genomic Context describing neighboring genes Neighboring gene SUN domain-containing protein 4 Neighboring gene uncharacterized LOC25488458 Neighboring gene uncharacterized LOC120579671 Neighboring gene putative F-box protein At3g16210

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein FAR1-RELATED SEQUENCE 2
Names
FAR-RED impaired response-like protein
putative transcription factor FAR family

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053044.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    678686..688725
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039832393.1 → XP_039688327.1  protein FAR1-RELATED SEQUENCE 2

    UniProtKB/TrEMBL
    A0A072UTY6
    Conserved Domains (1) summary
    pfam03101
    Location:65 → 153
    FAR1; FAR1 DNA-binding domain

  2. XM_013603315.3 → XP_013458769.1  protein FAR1-RELATED SEQUENCE 2

    UniProtKB/TrEMBL
    A0A072UTY6
    Conserved Domains (1) summary
    pfam03101
    Location:65 → 153
    FAR1; FAR1 DNA-binding domain

  3. XM_024778159.2 → XP_024633927.1  protein FAR1-RELATED SEQUENCE 2

    UniProtKB/TrEMBL
    A0A072UTY6
    Conserved Domains (1) summary
    pfam03101
    Location:65 → 153
    FAR1; FAR1 DNA-binding domain
Nucleotide Protein
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