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LOC25487735 basic leucine zipper 34 [ Medicago truncatula (barrel medic) ]

Gene ID: 25487735, updated on 7-Dec-2023

Summary

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Gene symbol
LOC25487735
Gene description
basic leucine zipper 34
Locus tag
MtrunA17_Chr2g0325131
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC25487735 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 2 NC_053043.1 (45131287..45135289)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 2 NC_016408.2 (39027294..39031201)

Chromosome 2 - NC_053043.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At1g06270 Neighboring gene zingipain-2 Neighboring gene RING-H2 finger protein ATL40-like Neighboring gene 60S ribosomal protein L10 Neighboring gene small nucleolar RNA Z196/R39/R59 family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
basic leucine zipper 34
Names
bZIP family transcription factor
putative transcription factor bZIP family

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053043.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    45131287..45135289
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013609734.3 → XP_013465188.1  basic leucine zipper 34

    UniProtKB/TrEMBL
    A0A072VB17, G7ZUL8
    Conserved Domains (1) summary
    cd14703
    Location:194 → 244
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
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