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LOC25483741 BEL1-like homeodomain protein 1 [ Medicago truncatula (barrel medic) ]

Gene ID: 25483741, updated on 7-Dec-2023

Summary

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Gene symbol
LOC25483741
Gene description
BEL1-like homeodomain protein 1
Locus tag
MtrunA17_Chr1g0177751
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC25483741 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 1 NC_053042.1 (29393181..29398117)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 1 NC_016407.2 (25416115..25421108)

Chromosome 1 - NC_053042.1Genomic Context describing neighboring genes Neighboring gene protein LEAD-SENSITIVE 1 Neighboring gene digalactosyldiacylglycerol synthase 1, chloroplastic Neighboring gene probable fructokinase-7 Neighboring gene uncharacterized LOC25483744

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression dynamics of the Medicago truncatula transcriptome during the symbiotic interaction with Sinorhizobium meliloti: which role for nitric oxide? Boscari A, et al. Plant Physiol, 2013 Jan. PMID 23136381, Free PMC Article
  2. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BEL1-like homeodomain protein 1
Names
BEL1-related homeotic protein
putative transcription factor Homeodomain-TALE-BEL family

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053042.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    29393181..29398117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039827169.1 → XP_039683103.1  BEL1-like homeodomain protein 1

    UniProtKB/TrEMBL
    A0A072VK10
    Conserved Domains (2) summary
    pfam05920
    Location:364 → 403
    Homeobox_KN; Homeobox KN domain
    pfam07526
    Location:161 → 298
    POX; Associated with HOX

  2. XM_024777589.2 → XP_024633357.1  BEL1-like homeodomain protein 1

    UniProtKB/TrEMBL
    A0A072VK10
    Conserved Domains (2) summary
    pfam05920
    Location:364 → 403
    Homeobox_KN; Homeobox KN domain
    pfam07526
    Location:161 → 298
    POX; Associated with HOX
Nucleotide Protein
Heading Accession and Version

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