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isp5 amino acid transmembrane transporter Isp5 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543028, updated on 18-Sep-2024

Summary

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Official Symbol
isp5
Official Full Name
amino acid transmembrane transporter Isp5
Primary source
PomBase:SPAC1039.09
Locus tag
SPOM_SPAC1039.09
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See isp5 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (5466757..5468649)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene alanine-glyoxylate transaminase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene serine acetyltransferase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Pmf1-like isoleucine synthesis protein mmf2 Neighboring gene alpha-glucosidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tor Signaling Regulates Transcription of Amino Acid Permeases through a GATA Transcription Factor Gaf1 in Fission Yeast. Ma Y, et al. PLoS One, 2015. PMID 26689777, Free PMC Article
  2. High-Throughput Identification of Nuclear Envelope Protein Interactions in Schizosaccharomyces pombe Using an Arrayed Membrane Yeast-Two Hybrid Library. Varberg JM, et al. G3 (Bethesda), 2020 Dec 3. PMID 33109728, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables amino acid transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in amino acid transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
amino acid transmembrane transporter Isp5

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    5466757..5468649
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020431.3 → NP_595000.1  amino acid transmembrane transporter Isp5 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595000.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P40901, Q9US32
    Conserved Domains (1) summary
    COG0833
    Location:37 → 579
    LysP; Amino acid permease [Amino acid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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