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caa1 aspartate aminotransferase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543020, updated on 18-Sep-2024

Summary

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Official Symbol
caa1
Official Full Name
aspartate aminotransferase
Primary source
PomBase:SPAC10F6.13c
Locus tag
SPOM_SPAC10F6.13C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
aat2
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Genomic context

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See caa1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (1230640..1232039, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene RIO family protein kinase Neighboring gene autophagy-associated protein kinase activator Atg17 Neighboring gene ncRNA Neighboring gene protein-S isoprenylcysteine O-methyltransferase Mam4 Neighboring gene ncRNA Neighboring gene ABC1 kinase family protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Crystal structure of L-aspartate aminotransferase from Schizosaccharomyces pombe. Jeong SY, et al. PLoS One, 2019. PMID 31465495, Free PMC Article
  2. The cytosolic form of aspartate aminotransferase is required for full activation of TOR complex 1 in fission yeast. Reidman S, et al. J Biol Chem, 2019 Nov 29. PMID 31641022, Free PMC Article
  3. Proximity-dependent biotinylation mediated by TurboID to identify protein-protein interaction networks in yeast. Larochelle M, et al. J Cell Sci, 2019 May 31. PMID 31064814
  4. Evolution of phosphoregulation: comparison of phosphorylation patterns across yeast species. Beltrao P, et al. PLoS Biol, 2009 Jun 16. PMID 19547744, Free PMC Article
  5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables L-aspartate:2-oxoglutarate aminotransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in aspartate biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in glutamate metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
aspartate aminotransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1230640..1232039 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018661.3 → NP_593264.1  aspartate aminotransferase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593264.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O42652
    Conserved Domains (2) summary
    COG1448
    Location:5 → 405
    TyrB; Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
    pfam00155
    Location:30 → 401
    Aminotran_1_2; Aminotransferase class I and II
Nucleotide Protein
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