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vps1 dynamin family protein Vps1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542724, updated on 18-Sep-2024

Summary

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Official Symbol
vps1
Official Full Name
dynamin family protein Vps1
Primary source
PomBase:SPAC767.01c
Locus tag
SPOM_SPAC767.01C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
SPAC9G1.14c
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Genomic context

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See vps1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (1996774..1999415, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene tRNA (m1A) methyltransferase complex catalytic subunit Trm61 Neighboring gene ncRNA Neighboring gene Swr1 complex/NuA4 histone acetyltransferase complex subunit Swc4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene poly(A) polymerase Cid16

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The dynamin-related protein Vps1 regulates vacuole fission, fusion and tubulation in the fission yeast, Schizosaccharomyces pombe. Röthlisberger S, et al. Fungal Genet Biol, 2009 Dec. PMID 19643199
  2. Dynamin-dependent biogenesis, cell cycle regulation and mitochondrial association of peroxisomes in fission yeast. Jourdain I, et al. Traffic, 2008 Mar. PMID 18088324
  3. Eng2 is a component of a dynamic protein complex required for endocytic uptake in fission yeast. Encinar del Dedo J, et al. Traffic, 2014 Oct. PMID 25040903
  4. Fission yeast Vps1 and Atg8 contribute to oxidative stress resistance. Mikawa T, et al. Genes Cells, 2010 Mar. PMID 20070859
  5. Quantitative analysis of the mechanism of endocytic actin patch assembly and disassembly in fission yeast. Sirotkin V, et al. Mol Biol Cell, 2010 Aug 15. PMID 20587778, Free PMC Article

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Vps1 and Atg8 cooperatively participate in vacuolar function, thereby contributing to oxidative stress resistance.
    Title: Fission yeast Vps1 and Atg8 contribute to oxidative stress resistance.
  2. results are consistent with a model of vacuole fission in which Vps1 creates a tubule of an appropriate diameter for subsequent scission by Dnm1
    Title: The dynamin-related protein Vps1 regulates vacuole fission, fusion and tubulation in the fission yeast, Schizosaccharomyces pombe.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables membrane scission GTPase motor activity TAS
Traceable Author Statement
more info
 PubMed 
enables microtubule binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in endocytosis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in intracellular distribution of mitochondria IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in mitochondrial fission IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in peroxisome fission IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in peroxisome organization IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in vacuole fusion, non-autophagic IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in vesicle scission NAS
Non-traceable Author Statement
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus HDA PubMed 
NOT is_active_in actin cortical patch IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytoplasm HDA PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in microtubule IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in peroxisome IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
dynamin family protein Vps1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1996774..1999415 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001356043.2 → NP_001342849.1  dynamin family protein Vps1 [Schizosaccharomyces pombe]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14309, Q9URZ5
    Conserved Domains (3) summary
    cd08771
    Location:25 → 311
    DLP_1; Dynamin_like protein family includes dynamins and Mx proteins
    pfam01031
    Location:233 → 517
    Dynamin_M; Dynamin central region
    pfam02212
    Location:590 → 678
    GED; Dynamin GTPase effector domain
Nucleotide Protein
Heading Accession and Version

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