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phospho-2-dehydro-3-deoxyheptonate aldolase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542597, updated on 18-Sep-2024

Summary

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Official Full Name
phospho-2-dehydro-3-deoxyheptonate aldolase
Primary source
PomBase:SPAP8A3.07c
Locus tag
SPOM_SPAP8A3.07C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (5326386..5328224, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ski complex-interacting GTPase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene U2 auxiliary factor small subunit Uaf2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene myosin II light chain cdc4 Neighboring gene serine/threonine protein phosphatase PP2A scaffold subunit Paa1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Two-step Protein Quality Control Pathway for a Misfolded DJ-1 Variant in Fission Yeast. Mathiassen SG, et al. J Biol Chem, 2015 Aug 21. PMID 26152728, Free PMC Article
  2. SIN-inhibitory phosphatase complex promotes Cdc11p dephosphorylation and propagates SIN asymmetry in fission yeast. Singh NS, et al. Curr Biol, 2011 Dec 6. PMID 22119525, Free PMC Article
  3. Proximity-dependent biotinylation mediated by TurboID to identify protein-protein interaction networks in yeast. Larochelle M, et al. J Cell Sci, 2019 May 31. PMID 31064814
  4. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
  5. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables 3-deoxy-7-phosphoheptulonate synthase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in aromatic amino acid family biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
is_active_in mitochondrion ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
phospho-2-dehydro-3-deoxyheptonate aldolase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    5326386..5328224 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020377.3 → NP_594946.1  phospho-2-dehydro-3-deoxyheptonate aldolase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594946.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UT09
    Conserved Domains (1) summary
    COG0722
    Location:16 → 367
    AroG1; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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Research Materials