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uncharacterized protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542555, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
PomBase:SPAC1952.06c
Locus tag
SPOM_SPAC1952.06C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (4975630..4977649, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene OUT family ubiquitin-specific cysteine protease Otu2 Neighboring gene ncRNA Neighboring gene SAGA complex histone acetyltransferase catalytic subunit Gcn5 Neighboring gene pyridoxamine 5'-phosphate oxidase Neighboring gene ncRNA Neighboring gene checkpoint clamp complex protein Rad1 Neighboring gene ncRNA Neighboring gene acetyl-CoA hydrolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sde2 is an intron-specific pre-mRNA splicing regulator activated by ubiquitin-like processing. Thakran P, et al. EMBO J, 2018 Jan 4. PMID 28947618, Free PMC Article
  2. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
  3. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
  4. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in mRNA cis splicing, via spliceosome IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
is_active_in nucleus HDA PubMed 
part_of spliceosomal complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4975630..4977649 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020237.3 → NP_594808.1  uncharacterized protein SPOM_SPAC1952.06C [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594808.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UUK1
    Conserved Domains (1) summary
    pfam08216
    Location:63 → 163
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear
Nucleotide Protein
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