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trm61 tRNA (m1A) methyltransferase complex catalytic subunit Trm61 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542192, updated on 18-Sep-2024

Summary

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Official Symbol
trm61
Official Full Name
tRNA (m1A) methyltransferase complex catalytic subunit Trm61
Primary source
PomBase:SPAC9G1.12
Locus tag
SPOM_SPAC9G1.12
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
cpd1
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Genomic context

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See trm61 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (1993657..1996196)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene PAK-like GC kinase Sid1 Neighboring gene inositol polyphosphate phosphatase Neighboring gene ncRNA Neighboring gene mitotic septin Spn4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Swr1 complex/NuA4 histone acetyltransferase complex subunit Swc4 Neighboring gene dynamin family protein Vps1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Initiator tRNA lacking 1-methyladenosine is targeted by the rapid tRNA decay pathway in evolutionarily distant yeast species. Tasak M, et al. PLoS Genet, 2022 Jul. PMID 35901126, Free PMC Article
  2. Large scale screening of genetic interaction with sgf73(+) in fission yeast. Guo Y, et al. Yi Chuan, 2014 Jul. PMID 25076038
  3. Transcription and chromatin-based surveillance mechanism controls suppression of cryptic antisense transcription. Heo DH, et al. Cell Rep, 2021 Sep 7. PMID 34496258, Free PMC Article
  4. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
  5. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables tRNA (adenine(58)-N1)-methyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in tRNA methylation IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of tRNA (m1A) methyltransferase complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
tRNA (m1A) methyltransferase complex catalytic subunit Trm61

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1993657..1996196
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019000.3 → NP_593567.1  tRNA (m1A) methyltransferase complex catalytic subunit Trm61 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593567.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14307
    Conserved Domains (2) summary
    COG2519
    Location:9 → 274
    Gcd14; tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]
    pfam08704
    Location:64 → 350
    GCD14; tRNA methyltransferase complex GCD14 subunit
Nucleotide Protein
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