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ssm4 dynactin microtubule-binding subunit, p150-Glued Ssm4 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542069, updated on 18-Sep-2024

Summary

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Official Symbol
ssm4
Official Full Name
dynactin microtubule-binding subunit, p150-Glued Ssm4
Primary source
PomBase:SPAC27D7.13c
Locus tag
SPOM_SPAC27D7.13C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
SPAC637.01c
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Genomic context

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See ssm4 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (4534674..4536736, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene tRNA-Asp Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene thioredoxin family protein But1 Neighboring gene ncRNA Neighboring gene RNA polymerase II-associated Paf1 complex subunit Tpr1 Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Microtubule-associated coiled-coil protein Ssm4 is involved in the meiotic development in fission yeast. Yamashita A, et al. Genes Cells, 1997 Feb. PMID 9167972
  2. Proper microtubule structure is vital for timely progression through meiosis in fission yeast. Yamashita A, et al. PLoS One, 2013. PMID 23755176, Free PMC Article
  3. Contribution of dynein light intermediate and intermediate chains to subcellular localization of the dynein-dynactin motor complex in Schizosaccharomyces pombe. Fujita I, et al. Genes Cells, 2010 Apr 1. PMID 20298435
  4. RNA-assisted nuclear transport of the meiotic regulator Mei2p in fission yeast. Yamashita A, et al. Cell, 1998 Oct 2. PMID 9778252
  5. The p150-Glued Ssm4p regulates microtubular dynamics and nuclear movement in fission yeast. Niccoli T, et al. J Cell Sci, 2004 Nov 1. PMID 15509865

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Ssm4p, a p150-Glued protein, is induced specifically in response to pheromone and is required for this nuclear movement.
    Title: The p150-Glued Ssm4p regulates microtubular dynamics and nuclear movement in fission yeast.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in dynein-driven meiotic oscillatory nuclear movement IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in meiosis I IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in nuclear migration involved in conjugation with cellular fusion IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cell cortex of cell tip IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cell tip IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cortical microtubule plus-end IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytoplasmic microtubule IDA
Inferred from Direct Assay
more info
 PubMed 
part_of dynactin complex TAS
Traceable Author Statement
more info
 PubMed 
is_active_in meiotic spindle pole body IDA
Inferred from Direct Assay
more info
 PubMed 
part_of microtubule associated complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in microtubule cytoskeleton HDA PubMed 
is_active_in mitotic spindle IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus leading edge IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in spindle IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in spindle pole body IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
dynactin microtubule-binding subunit, p150-Glued Ssm4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4534674..4536736 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020047.2 → NP_594619.1  dynactin microtubule-binding subunit, p150-Glued Ssm4 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594619.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O42667
    Conserved Domains (2) summary
    COG5244
    Location:1 → 670
    NIP100; Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:7 → 66
    CAP_GLY; CAP-Gly domain
Nucleotide Protein
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