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atg11 autophagy associated protein kinase regulator Atg11 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541735, updated on 18-Sep-2024

Summary

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Official Symbol
atg11
Official Full Name
autophagy associated protein kinase regulator Atg11
Primary source
PomBase:SPAC7D4.04
Locus tag
SPOM_SPAC7D4.04
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
cvt9; taf1
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Genomic context

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See atg11 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (2630448..2633551, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene dolichol-P-Man-dependent alpha(1-3) mannosyltransferase Alg3 Neighboring gene hydrolase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein ahk1 Neighboring gene ncRNA Neighboring gene SH3 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Atg1 kinase in fission yeast is activated by Atg11-mediated dimerization and cis-autophosphorylation. Pan ZQ, et al. Elife, 2020 Sep 10. PMID 32909946, Free PMC Article
  2. Schizosaccharomyces pombe taf1+ is required for nitrogen starvation-induced sexual development and for entering the dormant GO state. Ueno M, et al. Curr Genet, 2001 Jan. PMID 11270572
  3. Atg20- and Atg24-family proteins promote organelle autophagy in fission yeast. Zhao D, et al. J Cell Sci, 2016 Nov 15. PMID 27737912
  4. Visual detection of binary, ternary and quaternary protein interactions in fission yeast using a Pil1 co-tethering assay. Yu ZQ, et al. J Cell Sci, 2021 Oct 1. PMID 34499173
  5. Global analysis of fission yeast mating genes reveals new autophagy factors. Sun LL, et al. PLoS Genet, 2013. PMID 23950735, Free PMC Article

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular adaptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein kinase binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein serine/threonine kinase activator activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in autophagy of mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in macroautophagy IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in mitophagy IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in pexophagy IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in piecemeal microautophagy of the nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in reticulophagy IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in ribophagy IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of Atg1/ULK1 kinase complex EXP
Inferred from Experiment
more info
 PubMed 
part_of Atg1/ULK1 kinase complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytoplasm HDA PubMed 
is_active_in fungal-type vacuole membrane IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus HDA PubMed 
is_active_in phagophore assembly site IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in phagophore assembly site membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
autophagy associated protein kinase regulator Atg11

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2630448..2633551 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019284.3 → NP_593855.1  autophagy associated protein kinase regulator Atg11 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593855.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14261
    Conserved Domains (2) summary
    pfam07106
    Location:550 → 633
    TBPIP; Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
    pfam10377
    Location:797 → 922
    ATG11; Autophagy-related protein 11
Nucleotide Protein
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