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uncharacterized protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541436, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
PomBase:SPAC11H11.03c
Locus tag
SPOM_SPAC11H11.03C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003424.3 (4779020..4780301, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene protein mug162 Neighboring gene ESCRT I complex subunit Vps23 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pheromone p-factor receptor Mam2 Neighboring gene protein Fta6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
  2. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables endonuclease activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in DNA repair ISM
Inferred from Sequence Model
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4779020..4780301 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020149.3 → NP_594721.1  uncharacterized protein SPOM_SPAC11H11.03C [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594721.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UTP4
    Conserved Domains (2) summary
    smart00463
    Location:72 → 150
    SMR; Small MutS-related domain
    pfam08590
    Location:6 → 63
    DUF1771; Domain of unknown function (DUF1771)
Nucleotide Protein
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