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uncharacterized protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541259, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
PomBase:SPBC8D2.16c
Locus tag
SPOM_SPBC8D2.16C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (1386312..1388881, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene SNARE protein Sed5 Neighboring gene box H/ACA snoRNP assembly protein Shq1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene lipoic acid synthetase Lip5 Neighboring gene ncRNA Neighboring gene alpha-1,2-galactosyltransferase Gmh4 Neighboring gene adenosylhomocysteinase Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
  2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables RNA methyltransferase activity ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleolus ISO
Inferred from Sequence Orthology
more info
  
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1386312..1388881 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021473.3 → NP_595578.1  uncharacterized protein SPOM_SPBC8D2.16C [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595578.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13641
    Conserved Domains (1) summary
    COG2106
    Location:13 → 315
    MTH1; Predicted RNA methylase MTH1, SPOUT superfamily [General function prediction only]
Nucleotide Protein
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