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rtt109 histone lysine acetyltransferase Rtt109 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540945, updated on 18-Sep-2024

Summary

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Official Symbol
rtt109
Official Full Name
histone lysine acetyltransferase Rtt109
Primary source
PomBase:SPBC342.06c
Locus tag
SPOM_SPBC342.06C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
kat11
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Genomic context

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See rtt109 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (4213486..4214761, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DNA repair protein Neighboring gene ncRNA Neighboring gene 19S proteasome regulatory subunit Rpn12 Neighboring gene ncRNA Neighboring gene ribokinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pneumocystis carinii expresses an active Rtt109 histone acetyltransferase. Kottom TJ, et al. Am J Respir Cell Mol Biol, 2011 Jun. PMID 20656950, Free PMC Article
  2. Gcn5-mediated acetylation at MBF-regulated promoters induces the G1/S transcriptional wave. González-Medina A, et al. Nucleic Acids Res, 2019 Sep 19. PMID 31260531, Free PMC Article
  3. Regulation of histone H3 lysine 56 acetylation in Schizosaccharomyces pombe. Xhemalce B, et al. J Biol Chem, 2007 May 18. PMID 17369611
  4. Acetylation of lysine 56 of histone H3 catalyzed by RTT109 and regulated by ASF1 is required for replisome integrity. Han J, et al. J Biol Chem, 2007 Sep 28. PMID 17690098
  5. H2A.Z-dependent regulation of cohesin dynamics on chromosome arms. Tapia-Alveal C, et al. Mol Cell Biol, 2014 Jun. PMID 24687850, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables histone H3K56 acetyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables histone H3K56 acetyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in DNA damage response IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in chromatin IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
histone lysine acetyltransferase Rtt109

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    4213486..4214761 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023769.3 → NP_596749.1  histone lysine acetyltransferase Rtt109 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596749.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9Y7Y5
    Conserved Domains (1) summary
    COG5087
    Location:1 → 369
    RTT109; Uncharacterized conserved protein [Function unknown]
Nucleotide Protein
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