U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

clu1 protein Clu1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540905, updated on 14-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
clu1
Official Full Name
protein Clu1
Primary source
PomBase:SPBC530.06c
Locus tag
SPOM_SPBC530.06C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See clu1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (798995..802925, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene Tea1-anchoring protein Mod5 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene transcription factor Neighboring gene ncRNA Neighboring gene TENA/THI family protein, domain found in context with a broad range of enzymes Neighboring gene ncRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Regulation of the nuclear poly(A)-binding protein by arginine methylation in fission yeast. Perreault A, et al. J Biol Chem, 2007 Mar 9. PMID 17213188
  2. The fission yeast nucleoporin Alm1 is required for proteasomal degradation of kinetochore components. Salas-Pino S, et al. J Cell Biol, 2017 Nov 6. PMID 28974540, Free PMC Article
  3. Transcription and chromatin-based surveillance mechanism controls suppression of cryptic antisense transcription. Heo DH, et al. Cell Rep, 2021 Sep 7. PMID 34496258, Free PMC Article
  4. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
  5. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in intracellular distribution of mitochondria IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in mitochondrion organization IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
protein Clu1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    798995..802925 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021226.3 → NP_595319.2  LOW QUALITY PROTEIN: protein Clu1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595319.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O59742
    Conserved Domains (6) summary
    sd00006
    Location:984 → 1012
    TPR; TPR repeat [structural motif]
    pfam12807
    Location:707 → 868
    eIF3_p135; Translation initiation factor eIF3 subunit 135
    pfam13236
    Location:342 → 564
    CLU; Clustered mitochondria
    pfam13374
    Location:983 → 1022
    TPR_10; Tetratricopeptide repeat
    pfam13424
    Location:980 → 1055
    TPR_12; Tetratricopeptide repeat
    pfam15044
    Location:52 → 128
    CLU_N; Mitochondrial function, CLU-N-term
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials