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shr3 chaperone protein Shr3 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540800, updated on 18-Sep-2024

Summary

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Official Symbol
shr3
Official Full Name
chaperone protein Shr3
Primary source
PomBase:SPBC409.20c
Locus tag
SPOM_SPBC409.20C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
psh3
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Genomic context

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See shr3 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (1174480..1175913, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene phosphatidic acid phosphatase Neighboring gene metaxin 1 Neighboring gene ncRNA Neighboring gene translocation subcomplex subunit Sec66 Neighboring gene mitochondrial translation elongation factor G Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The SHR3 homologue from S. pombe demonstrates a conserved function of ER packaging chaperones. Martínez P, et al. J Cell Sci, 2000 Dec. PMID 11069779
  2. ER-localized Shr3 is a selective co-translational folding chaperone necessary for amino acid permease biogenesis. Myronidi I, et al. J Cell Biol, 2023 Sep 4. PMID 37477900, Free PMC Article
  3. Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth. Rallis C, et al. Biol Open, 2014 Feb 15. PMID 24463365, Free PMC Article
  4. Large scale screening of genetic interaction with sgf73(+) in fission yeast. Guo Y, et al. Yi Chuan, 2014 Jul. PMID 25076038
  5. High-Throughput Identification of Nuclear Envelope Protein Interactions in Schizosaccharomyces pombe Using an Arrayed Membrane Yeast-Two Hybrid Library. Varberg JM, et al. G3 (Bethesda), 2020 Dec 3. PMID 33109728, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein folding chaperone ISO
Inferred from Sequence Orthology
more info
 PubMed 
enables unfolded protein binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein insertion into ER membrane ISO
Inferred from Sequence Orthology
more info
 PubMed 
Component Evidence Code Pubs
is_active_in endoplasmic reticulum HDA PubMed 
is_active_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
chaperone protein Shr3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1174480..1175913 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021380.3 → NP_595470.1  chaperone protein Shr3 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595470.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9Y876
    Conserved Domains (1) summary
    smart00786
    Location:12 → 209
    SHR3_chaperone; ER membrane protein SH3
Nucleotide Protein
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