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pfd5 prefoldin subunit 5 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540664, updated on 18-Sep-2024

Summary

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Official Symbol
pfd5
Official Full Name
prefoldin subunit 5
Primary source
PomBase:SPBC215.02
Locus tag
SPOM_SPBC215.02
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
bob1; gim5
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Genomic context

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See pfd5 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003423.3 (4027406..4029143)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene GTPase-activating protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene COP9/signalosome complex subunit Csn1 Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bob1, a Gim5/MM-1/Pfd5 homolog, interacts with the MAP kinase kinase Byr1 to regulate sexual differentiation in the fission yeast, Schizosaccharomyces pombe. Henkel J, et al. Differentiation, 2001 Jun. PMID 11683500
  2. Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth. Rallis C, et al. Biol Open, 2014 Feb 15. PMID 24463365, Free PMC Article
  3. Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes. Dixon SJ, et al. Proc Natl Acad Sci U S A, 2008 Oct 28. PMID 18931302, Free PMC Article
  4. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
  5. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in RNA polymerase I assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in RNA polymerase II core complex assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in RNA polymerase III assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein folding IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
is_active_in cell division site IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cell tip IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 
part_of prefoldin complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
prefoldin subunit 5

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    4027406..4029143
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022602.3 → NP_596679.1  prefoldin subunit 5 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596679.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94307
    Conserved Domains (1) summary
    COG1730
    Location:8 → 142
    GIM5; Prefoldin subunit 5 [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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