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ckb2 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540306, updated on 11-Sep-2024

Summary

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Official Symbol
ckb2
Primary source
PomBase:SPBC2G5.02c
Locus tag
SPOM_SPBC2G5.02C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (2577791..2580138, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene Ragulator-Rag complex subunit Lam1 Neighboring gene cytochrome b5 Neighboring gene tRNA-Phe Neighboring gene Ca(2+) binding protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene cytosolic thiouridylase subunit Ctu1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Casein kinase 2 inhibits HomolD-directed transcription by Rrn7 in Schizosaccharomyces pombe. Moreira-Ramos S, et al. FEBS J, 2015 Feb. PMID 25410910
  2. Crosstalk between casein kinase II and Ste20-related kinase Nak1. Cipak L, et al. Cell Cycle, 2013 Mar 15. PMID 23462181, Free PMC Article
  3. Phosphorylation of the RNA-binding protein Zfs1 modulates sexual differentiation in fission yeast. Navarro FJ, et al. J Cell Sci, 2017 Dec 15. PMID 29084823, Free PMC Article
  4. Epe1 recruits BET family bromodomain protein Bdf2 to establish heterochromatin boundaries. Wang J, et al. Genes Dev, 2013 Sep 1. PMID 24013502, Free PMC Article
  5. Expanded Interactome of the Intrinsically Disordered Protein Dss1. Schenstrøm SM, et al. Cell Rep, 2018 Oct 23. PMID 30355493, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. data suggest that CK2 inhibits ribosomal protein gene transcription in S. pombe via phosphorylation of Rrn7 at Thr67.
    Title: Casein kinase 2 inhibits HomolD-directed transcription by Rrn7 in Schizosaccharomyces pombe.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein kinase regulator activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein serine/threonine kinase inhibitor activity ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase I ISO
Inferred from Sequence Orthology
more info
  
involved_in regulation of transcription by RNA polymerase III IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in signal transduction IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
part_of UTP-C complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus HDA PubMed 
part_of protein kinase CK2 complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
CK2 family regulatory subunit protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2577791..2580138 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021974.3 → NP_596063.1  CK2 family regulatory subunit protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596063.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94281
    Conserved Domains (1) summary
    COG5041
    Location:14 → 242
    SKB2; Casein kinase II, beta subunit [Signal transduction mechanisms / Cell division and chromosome partitioning / Transcription]
Nucleotide Protein
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