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siw14 inositol pyrophosphatase Siw14 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540134, updated on 18-Sep-2024

Summary

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Official Symbol
siw14
Official Full Name
inositol pyrophosphatase Siw14
Primary source
PomBase:SPBC17A3.03c
Locus tag
SPOM_SPBC17A3.03C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See siw14 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003423.3 (1403946..1405732, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene tRNA-Leu Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein aim19 Neighboring gene ncRNA Neighboring gene 5S ribosomal RNA Neighboring gene methionine--tRNA (Met) ligase Rar1 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The fission yeast nucleoporin Alm1 is required for proteasomal degradation of kinetochore components. Salas-Pino S, et al. J Cell Biol, 2017 Nov 6. PMID 28974540, Free PMC Article
  2. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables exopolyphosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables inorganic diphosphate phosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables inositol diphosphate tetrakisphosphate diphosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in diphosphoinositol polyphosphate metabolic process ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
inositol pyrophosphatase Siw14

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1403946..1405732 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021481.3 → NP_595585.2  inositol pyrophosphatase Siw14 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595585.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13635, Q9UUF3
    Conserved Domains (2) summary
    pfam03162
    Location:80 → 241
    Y_phosphatase2; Tyrosine phosphatase family
    COG2365
    Location:37 → 287
    Oca4; Protein tyrosine/serine phosphatase [Signal transduction mechanisms]
Nucleotide Protein
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