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amo1 nuclear rim protein Amo1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539911, updated on 18-Sep-2024

Summary

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Official Symbol
amo1
Official Full Name
nuclear rim protein Amo1
Primary source
PomBase:SPBC15D4.10c
Locus tag
SPOM_SPBC15D4.10C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See amo1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (3028685..3030225, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene autophagy-associated protein Atg9 Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene cystathionine gamma-synthase Neighboring gene ncRNA Neighboring gene Mam33 family protein Neighboring gene ncRNA Neighboring gene protein mug98

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The nuclear rim protein Amo1 is required for proper microtubule cytoskeleton organisation in fission yeast. Pardo M, et al. J Cell Sci, 2005 Apr 15. PMID 15797925
  2. Acute Heat Stress Leads to Reversible Aggregation of Nuclear Proteins into Nucleolar Rings in Fission Yeast. Gallardo P, et al. Cell Rep, 2020 Nov 10. PMID 33176152
  3. Characterization of nuclear pore complex components in fission yeast Schizosaccharomyces pombe. Asakawa H, et al. Nucleus, 2014 Mar-Apr. PMID 24637836, Free PMC Article
  4. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
  5. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
NOT is_active_in mitotic spindle pole body IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nuclear periphery IDA
Inferred from Direct Assay
more info
 PubMed 
part_of nuclear pore IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
nuclear rim protein Amo1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3028685..3030225 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022169.3 → NP_596250.1  nuclear rim protein Amo1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596250.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74315
    Conserved Domains (2) summary
    smart00356
    Location:1 → 22
    ZnF_C3H1; zinc finger
    COG5084
    Location:139 → 453
    YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
Nucleotide Protein
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