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rps3 40S ribosomal protein uS3 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539797, updated on 18-Sep-2024

Summary

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Official Symbol
rps3
Official Full Name
40S ribosomal protein uS3
Primary source
PomBase:SPBC16G5.14c
Locus tag
SPOM_SPBC16G5.14C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See rps3 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (4238212..4239339, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene exosome subunit Rrp42 Neighboring gene ncRNA Neighboring gene DNA topoisomerase III Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein ptf2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DNA-binding forkhead transcription factor Fkh2 Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Receptor for activated C-kinase (RACK1) homolog Cpc2 facilitates the general amino acid control response through Gcn2 kinase in fission yeast. Tarumoto Y, et al. J Biol Chem, 2013 Jun 28. PMID 23671279, Free PMC Article
  2. Endogenous U2·U5·U6 snRNA complexes in S. pombe are intron lariat spliceosomes. Chen W, et al. RNA, 2014 Mar. PMID 24442611, Free PMC Article
  3. Proteomic and functional analysis of the noncanonical poly(A) polymerase Cid14. Keller C, et al. RNA, 2010 Jun. PMID 20403971, Free PMC Article
  4. A Two-step Protein Quality Control Pathway for a Misfolded DJ-1 Variant in Fission Yeast. Mathiassen SG, et al. J Biol Chem, 2015 Aug 21. PMID 26152728, Free PMC Article
  5. Epe1 recruits BET family bromodomain protein Bdf2 to establish heterochromatin boundaries. Wang J, et al. Genes Dev, 2013 Sep 1. PMID 24013502, Free PMC Article

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translation ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
40S ribosomal protein uS3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    4238212..4239339 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023783.3 → NP_596763.1  40S ribosomal protein uS3 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596763.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O60128, Q14TB2
    Conserved Domains (3) summary
    cd02413
    Location:17 → 97
    40S_S3_KH; K homology RNA-binding (KH) domain of the eukaryotic 40S small ribosomal subunit protein S3. S3 is part of the head region of the 40S ribosomal subunit and is believed to interact with mRNA as it threads its way from the latch into the channel. The KH ...
    PTZ00084
    Location:7 → 217
    PTZ00084; 40S ribosomal protein S3; Provisional
    pfam00189
    Location:107 → 188
    Ribosomal_S3_C; Ribosomal protein S3, C-terminal domain
Nucleotide Protein
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