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alp16 gamma tubulin complex GCP6 subunit Alp16 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539309, updated on 18-Sep-2024

Summary

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Official Symbol
alp16
Official Full Name
gamma tubulin complex GCP6 subunit Alp16
Primary source
PomBase:SPCC4G3.19
Locus tag
SPOM_SPCC4G3.19
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See alp16 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (432264..434786, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ribosome biogenesis protein Rix1 Neighboring gene ncRNA Neighboring gene metal-dependent HD domain-containing phosphohydrolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A fourth component of the fission yeast gamma-tubulin complex, Alp16, is required for cytoplasmic microtubule integrity and becomes indispensable when gamma-tubulin function is compromised. Fujita A, et al. Mol Biol Cell, 2002 Jul. PMID 12134075, Free PMC Article
  2. Microtubule stabilization in vivo by nucleation-incompetent γ-tubulin complex. Anders A, et al. J Cell Sci, 2011 Apr 15. PMID 21444751, Free PMC Article
  3. Synergistic role of fission yeast Alp16GCP6 and Mzt1MOZART1 in γ-tubulin complex recruitment to mitotic spindle pole bodies and spindle assembly. Masuda H, et al. Mol Biol Cell, 2016 Jun 1. PMID 27053664, Free PMC Article
  4. Microtubule nucleation by γ-tubulin complexes. Kollman JM, et al. Nat Rev Mol Cell Biol, 2011 Oct 12. PMID 21993292, Free PMC Article
  5. Noncore components of the fission yeast gamma-tubulin complex. Anders A, et al. Mol Biol Cell, 2006 Dec. PMID 17021256, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables gamma-tubulin binding IBA
Inferred from Biological aspect of Ancestor
more info
  
contributes_to microtubule minus-end binding IBA
Inferred from Biological aspect of Ancestor
more info
  
contributes_to microtubule nucleator activity TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic microtubule organization IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in cytoplasmic microtubule organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in gamma-tubulin complex localization to mitotic spindle pole body IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in meiotic cell cycle IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in microtubule nucleation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in microtubule nucleation by interphase microtubule organizing center IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in mitotic cell cycle IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in spindle assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in equatorial microtubule organizing center IDA
Inferred from Direct Assay
more info
 PubMed 
part_of gamma-tubulin complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of gamma-tubulin ring complex IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in mitotic spindle pole body HDA PubMed 
is_active_in mitotic spindle pole body IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
gamma tubulin complex GCP6 subunit Alp16

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    432264..434786 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022812.3 → NP_587819.1  gamma tubulin complex GCP6 subunit Alp16 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_587819.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P87244
    Conserved Domains (1) summary
    cl27192
    Location:194 → 369
    Spc97_Spc98; Spc97 / Spc98 family
Nucleotide Protein
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