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cnd3 condensin complex non-SMC subunit Cnd3 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539121, updated on 18-Sep-2024

Summary

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Official Symbol
cnd3
Official Full Name
condensin complex non-SMC subunit Cnd3
Primary source
PomBase:SPCC188.03
Locus tag
SPOM_SPCC188.03
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See cnd3 in Genome Data Viewer
Location:
chromosome: III
Exon count:
5
Sequence:
Chromosome: III; NC_003421.2 (1478203..1481959)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene tRNA-Lys Neighboring gene serine/threonine protein phosphatase PP2A regulatory subunit B-56 Par1 Neighboring gene Ndc80 complex subunit Spc25 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene signal recognition particle subunit Srp54

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural Basis for a Safety-Belt Mechanism That Anchors Condensin to Chromosomes. Kschonsak M, et al. Cell, 2017 Oct 19. PMID 28988770, Free PMC Article
  2. ATPase-dependent auto-phosphorylation of the open condensin hinge diminishes DNA binding. Akai Y, et al. Open Biol, 2014 Dec. PMID 25520186, Free PMC Article
  3. Establishment of dsDNA-dsDNA interactions by the condensin complex. Tang M, et al. Mol Cell, 2023 Nov 2. PMID 37820734, Free PMC Article
  4. Fission yeast condensin complex: essential roles of non-SMC subunits for condensation and Cdc2 phosphorylation of Cut3/SMC4. Sutani T, et al. Genes Dev, 1999 Sep 1. PMID 10485849, Free PMC Article
  5. Condensin phosphorylated by the Aurora-B-like kinase Ark1 is continuously required until telophase in a mode distinct from Top2. Nakazawa N, et al. J Cell Sci, 2011 Jun 1. PMID 21540296

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
contributes_to ATP hydrolysis activity IDA
Inferred from Direct Assay
more info
 PubMed 
contributes_to DNA-DNA tethering activity EXP
Inferred from Experiment
more info
 PubMed 
contributes_to DNA/DNA annealing activity IDA
Inferred from Direct Assay
more info
 PubMed 
contributes_to double-stranded DNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
contributes_to single-stranded DNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
contributes_to topological DNA co-entrapment activity EXP
Inferred from Experiment
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic chromosome condensation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in mitotic chromosome condensation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in condensed chromosome IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of condensin complex IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
condensin complex non-SMC subunit Cnd3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1478203..1481959
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023197.3 → NP_588207.1  condensin complex non-SMC subunit Cnd3 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588207.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q10429
    Conserved Domains (2) summary
    COG5218
    Location:1 → 875
    YCG1; Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning]
    sd00044
    Location:81 → 109
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
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