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Adm adrenomedullin [ Rattus norvegicus (Norway rat) ]

Gene ID: 25026, updated on 2-Nov-2024

Summary

Official Symbol
Admprovided by RGD
Official Full Name
adrenomedullinprovided by RGD
Primary source
RGD:2047
See related
AllianceGenome:RGD:2047
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Ap; RATAP; H39316
Summary
Enables adrenomedullin receptor binding activity. Involved in several processes, including androgen metabolic process; regulation of heart contraction; and response to insulin. Located in extracellular space. Used to study congestive heart failure and toxic shock syndrome. Biomarker of glomerulonephritis; hypertension; hypertrophic cardiomyopathy; obstructive jaundice; and ureteral obstruction. Human ortholog(s) of this gene implicated in brain infarction; breast cancer; pancreatic cancer; and pulmonary hypertension. Orthologous to human ADM (adrenomedullin). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Adrenal (RPKM 36.0), Heart (RPKM 25.0) and 9 other tissues See more
Orthologs
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Genomic context

See Adm in Genome Data Viewer
Location:
1q33
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (174164178..174182372)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (164745484..164747655)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (175443189..175447260)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene SET binding factor 2 Neighboring gene lysine methyltransferase 5A, pseudogene 1 Neighboring gene uncharacterized LOC120097354 Neighboring gene karyopherin subunit alpha 1, pseudogene 9 Neighboring gene uncharacterized LOC108349612

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables adrenomedullin receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables adrenomedullin receptor binding IDA
Inferred from Direct Assay
more info
PubMed 
enables adrenomedullin receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor internalization ISO
Inferred from Sequence Orthology
more info
 
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in adrenomedullin receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in adrenomedullin receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in androgen metabolic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in animal organ regeneration IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in antimicrobial humoral immune response mediated by antimicrobial peptide ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within branching involved in labyrinthine layer morphogenesis ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of cell population proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to xenobiotic stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within developmental growth ISO
Inferred from Sequence Orthology
more info
 
involved_in female pregnancy IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within heart development ISO
Inferred from Sequence Orthology
more info
 
involved_in heart development ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of cell population proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of vascular permeability ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of vasoconstriction ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within neural tube closure ISO
Inferred from Sequence Orthology
more info
 
involved_in neuron projection regeneration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in odontogenesis of dentin-containing tooth IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in positive regulation of angiogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within positive regulation of cell population proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cytosolic calcium ion concentration IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of heart rate IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of heart rate IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of heart rate ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of vasculogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in receptor internalization ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of systemic arterial blood pressure IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of systemic arterial blood pressure ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of the force of heart contraction IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation of urine volume ISO
Inferred from Sequence Orthology
more info
 
involved_in response to ether IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to glucocorticoid IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to hypoxia IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to insulin IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to lipopolysaccharide IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to starvation IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within spongiotrophoblast layer development ISO
Inferred from Sequence Orthology
more info
 
involved_in vascular associated smooth muscle cell development ISO
Inferred from Sequence Orthology
more info
 
involved_in vasculogenesis ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_012715.2NP_036847.1  pro-adrenomedullin precursor

    See identical proteins and their annotated locations for NP_036847.1

    Status: PROVISIONAL

    Source sequence(s)
    JAXUCZ010000001
    UniProtKB/Swiss-Prot
    P43145
    UniProtKB/TrEMBL
    A6I816
    Conserved Domains (1) summary
    pfam00214
    Location:2148
    Calc_CGRP_IAPP; Calcitonin / CGRP / IAPP family

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    174164178..174182372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063281152.1XP_063137222.1  pro-adrenomedullin isoform X1

    UniProtKB/Swiss-Prot
    P43145
    UniProtKB/TrEMBL
    A6I816
  2. XM_063281156.1XP_063137226.1  pro-adrenomedullin isoform X1

    UniProtKB/Swiss-Prot
    P43145
    UniProtKB/TrEMBL
    A6I816