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CIMG_13558 DNA replication helicase Dna2 [ Coccidioides immitis RS ]

Gene ID: 24165185, updated on 31-Oct-2024

Summary

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Gene symbol
CIMG_13558
Gene description
DNA replication helicase Dna2
Locus tag
CIMG_13558
See related
FungiDB:CIMG_13558; VEuPathDB:CIMG_13558
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Coccidioides immitis RS (strain: RS)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides
Old locus tag
CIMG_10249; CIMG_10250
Orthologs
Aspergillus fumigatus all
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Genomic context

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See CIMG_13558 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_004504307.1Genomic Context describing neighboring genes Neighboring gene SWI/SNF family DNA-dependent ATPase Ris1 Neighboring gene C6 transcription factor Prf Neighboring gene WD repeat protein Neighboring gene ribonuclease P/MRP protein subunit RPP40 Neighboring gene mitochondrial 2-oxodicarboxylate carrier protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004504307.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-flap endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in replication fork reversal IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA replication helicase Dna2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004504307.1 Reference assembly

    Range
    1124548..1129757 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004444703.1 → XP_004444760.1  DNA replication helicase Dna2 [Coccidioides immitis RS]

    See identical proteins and their annotated locations for XP_004444760.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D8JVC9, A0A0J6YRN4
    Conserved Domains (5) summary
    TIGR00376
    Location:925 → 1557
    TIGR00376; DNA helicase, putative
    pfam08696
    Location:566 → 769
    Dna2; DNA replication factor Dna2
    pfam13087
    Location:1310 → 1536
    AAA_12; AAA domain
    cl00641
    Location:715 → 872
    Cas4_I-A_I-B_I-C_I-D_II-B; CRISPR/Cas system-associated protein Cas4
    cl21455
    Location:1133 → 1335
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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