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F751_4528 Ethylene-responsive transcription factor [ Auxenochlorella protothecoides ]

Gene ID: 23615919, updated on 9-Nov-2023

Summary

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Gene symbol
F751_4528
Gene description
Ethylene-responsive transcription factor
Locus tag
F751_4528
Gene type
protein coding
RNA name
Ethylene-responsive transcription factor
RefSeq status
PROVISIONAL
Organism
Auxenochlorella protothecoides (strain: 0710)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
3

NW_011934321.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene putative inactive purple acid phosphatase 27 Neighboring gene RWD domain-containing protein 2B Neighboring gene Alanine-glyoxylate aminotransferase 2-like protein 1, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011934321.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Oil accumulation mechanisms of the oleaginous microalga Chlorella protothecoides revealed through its genome, transcriptomes, and proteomes. Gao C, et al. BMC Genomics, 2014 Jul 10. PMID 25012212, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ethylene-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Ethylene-responsive transcription factor
XP_011400225.1
  • Ethylene-responsive transcription factor ERF112

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_011934321.1 Reference assembly

    Range
    260791..262673
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011401923.1 → XP_011400225.1  Ethylene-responsive transcription factor [Auxenochlorella protothecoides]

    See identical proteins and their annotated locations for XP_011400225.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A087SNF4
    Conserved Domains (1) summary
    cl00033
    Location:21 → 77
    AP2; DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor ...
Nucleotide Protein
Heading Accession and Version

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