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LOC21410124 transcription factor bHLH95 [ Morus notabilis ]

Gene ID: 21410124, updated on 21-Dec-2023

Summary

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Gene symbol
LOC21410124
Gene description
transcription factor bHLH95
Locus tag
L484_027507
Gene type
protein coding
RefSeq status
MODEL
Organism
Morus notabilis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Moreae; Morus
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Genomic context

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See LOC21410124 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM41409v2 (GCF_000414095.1) Unplaced Scaffold NW_010366164.1 (1075059..1077398)

NW_010366164.1Genomic Context describing neighboring genes Neighboring gene protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 Neighboring gene E3 ubiquitin-protein ligase MBR2 Neighboring gene U-box domain-containing protein 26 Neighboring gene PI-PLC X domain-containing protein At5g67130

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010366164 Unplaced Scaffold Reference ASM41409v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosperm development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor bHLH95

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Morus notabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41409v2

Genomic

  1. NW_010366164.1 Reference ASM41409v2

    Range
    1075059..1077398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024173160.1 → XP_024028928.1  transcription factor bHLH95

    UniProtKB/TrEMBL
    W9SMI5
    Conserved Domains (2) summary
    cd04873
    Location:255 → 293
    ACT_UUR-ACR-like; ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD
    cd00083
    Location:106 → 149
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
Nucleotide Protein
Heading Accession and Version

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