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LOC21407541 protein CUP-SHAPED COTYLEDON 3 [ Morus notabilis ]

Gene ID: 21407541, updated on 21-Dec-2023

Summary

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Gene symbol
LOC21407541
Gene description
protein CUP-SHAPED COTYLEDON 3
Locus tag
L484_024816
Gene type
protein coding
RefSeq status
MODEL
Organism
Morus notabilis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Moreae; Morus
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Genomic context

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See LOC21407541 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM41409v2 (GCF_000414095.1) Unplaced Scaffold NW_010360279.1 (458268..461250, complement)

NW_010360279.1Genomic Context describing neighboring genes Neighboring gene increased DNA methylation 3 Neighboring gene probable inorganic phosphate transporter 1-9 Neighboring gene cysteine protease XCP2 Neighboring gene monosaccharide-sensing protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010360279 Unplaced Scaffold Reference ASM41409v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein CUP-SHAPED COTYLEDON 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Morus notabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41409v2

Genomic

  1. NW_010360279.1 Reference ASM41409v2

    Range
    458268..461250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024164337.1 → XP_024020105.1  protein CUP-SHAPED COTYLEDON 3

    UniProtKB/TrEMBL
    W9QWF7
    Conserved Domains (1) summary
    pfam02365
    Location:22 → 148
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
Heading Accession and Version

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