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LOC21404648 ethylene-responsive transcription factor ERF034 [ Morus notabilis ]

Gene ID: 21404648, updated on 21-Dec-2023

Summary

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Gene symbol
LOC21404648
Gene description
ethylene-responsive transcription factor ERF034
Gene type
protein coding
RefSeq status
MODEL
Organism
Morus notabilis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Moreae; Morus
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Genomic context

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See LOC21404648 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM41409v2 (GCF_000414095.1) Unplaced Scaffold NW_010357868.1 (332077..333448, complement)

NW_010357868.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase BRE1-like 1 Neighboring gene autophagy-related protein 3 Neighboring gene chaperone protein dnaJ A6 Neighboring gene UDP-glycosyltransferase 72B1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010357868 Unplaced Scaffold Reference ASM41409v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF034

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Morus notabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41409v2

Genomic

  1. NW_010357868.1 Reference ASM41409v2

    Range
    332077..333448 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024177183.1 → XP_024032951.1  LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF034

    UniProtKB/TrEMBL
    W9R3T6
    Conserved Domains (1) summary
    cd00018
    Location:86 → 146
    AP2; DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor ...
Nucleotide Protein
Heading Accession and Version

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