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LOC21403530 transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [ Morus notabilis ]

Gene ID: 21403530, updated on 21-Dec-2023

Summary

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Gene symbol
LOC21403530
Gene description
transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
Locus tag
L484_020640
Gene type
protein coding
RefSeq status
MODEL
Organism
Morus notabilis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Moreae; Morus
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Genomic context

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See LOC21403530 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM41409v2 (GCF_000414095.1) Unplaced Scaffold NW_010367841.1 (441879..443786)

NW_010367841.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase RZFP34 Neighboring gene transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR Neighboring gene phosphoglycolate phosphatase 1B, chloroplastic Neighboring gene CMP-sialic acid transporter 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010367841 Unplaced Scaffold Reference ASM41409v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Morus notabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41409v2

Genomic

  1. NW_010367841.1 Reference ASM41409v2

    Range
    441879..443786
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024175687.1 → XP_024031455.1  transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR

    UniProtKB/TrEMBL
    W9SXI9
    Conserved Domains (1) summary
    smart00353
    Location:130 → 178
    HLH; helix loop helix domain
Nucleotide Protein
Heading Accession and Version

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