U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC21402500 transcription factor bHLH69 [ Morus notabilis ]

Gene ID: 21402500, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC21402500
Gene description
transcription factor bHLH69
Locus tag
L484_019561
Gene type
protein coding
RefSeq status
MODEL
Organism
Morus notabilis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Moreae; Morus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC21402500 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM41409v2 (GCF_000414095.1) Unplaced Scaffold NW_010365936.1 (86224..88996)

NW_010365936.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC21402498 Neighboring gene E3 ubiquitin-protein ligase RNF144A Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A Neighboring gene conserved oligomeric Golgi complex subunit 3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_010365936 Unplaced Scaffold Reference ASM41409v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor bHLH69

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Morus notabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41409v2

Genomic

  1. NW_010365936.1 Reference ASM41409v2

    Range
    86224..88996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010108781.1 → XP_010107083.1  transcription factor bHLH69

    See identical proteins and their annotated locations for XP_010107083.1

    UniProtKB/TrEMBL
    W9SKA1
    Conserved Domains (1) summary
    smart00353
    Location:283 → 331
    HLH; helix loop helix domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases