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LOC21399805 AP2-like ethylene-responsive transcription factor AIL5 [ Morus notabilis ]

Gene ID: 21399805, updated on 21-Dec-2023

Summary

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Gene symbol
LOC21399805
Gene description
AP2-like ethylene-responsive transcription factor AIL5
Locus tag
L484_016770
Gene type
protein coding
RefSeq status
MODEL
Organism
Morus notabilis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Moreae; Morus
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Genomic context

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See LOC21399805 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM41409v2 (GCF_000414095.1) Unplaced Scaffold NW_010360080.1 (519960..523243, complement)

NW_010360080.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At2g42920, chloroplastic Neighboring gene VIN3-like protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010360080 Unplaced Scaffold Reference ASM41409v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP2-like ethylene-responsive transcription factor AIL5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Morus notabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41409v2

Genomic

  1. NW_010360080.1 Reference ASM41409v2

    Range
    519960..523243 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024164149.1 → XP_024019917.1  AP2-like ethylene-responsive transcription factor AIL5

    UniProtKB/TrEMBL
    W9QVY5
    Conserved Domains (1) summary
    smart00380
    Location:120 → 184
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
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