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LOC21399161 transcription factor bHLH18 [ Morus notabilis ]

Gene ID: 21399161, updated on 21-Dec-2023

Summary

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Gene symbol
LOC21399161
Gene description
transcription factor bHLH18
Locus tag
L484_016091
Gene type
protein coding
RefSeq status
MODEL
Organism
Morus notabilis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Moreae; Morus
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Genomic context

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See LOC21399161 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM41409v2 (GCF_000414095.1) Unplaced Scaffold NW_010364639.1 (114798..118169, complement)

NW_010364639.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 Neighboring gene uncharacterized LOC112093216 Neighboring gene transcription factor bHLH18 Neighboring gene pentatricopeptide repeat-containing protein At2g13600

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010364639 Unplaced Scaffold Reference ASM41409v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor bHLH18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Morus notabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41409v2

Genomic

  1. NW_010364639.1 Reference ASM41409v2

    Range
    114798..118169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010106800.2 → XP_010105102.1  transcription factor bHLH18

    See identical proteins and their annotated locations for XP_010105102.1

    UniProtKB/TrEMBL
    W9RQB0
    Conserved Domains (2) summary
    smart00353
    Location:206 → 252
    HLH; helix loop helix domain
    pfam05874
    Location:139 → 212
    PBAN; Pheromone biosynthesis activating neuropeptide (PBAN)
Nucleotide Protein
Heading Accession and Version

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