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LOC21397367 probable WRKY transcription factor 27 [ Morus notabilis ]

Gene ID: 21397367, updated on 21-Dec-2023

Summary

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Gene symbol
LOC21397367
Gene description
probable WRKY transcription factor 27
Locus tag
L484_014218
Gene type
protein coding
RefSeq status
MODEL
Organism
Morus notabilis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Moreae; Morus
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Genomic context

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See LOC21397367 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM41409v2 (GCF_000414095.1) Unplaced Scaffold NW_010365163.1 (235309..237022, complement)

NW_010365163.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At5g52850, chloroplastic Neighboring gene probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial Neighboring gene uncharacterized LOC21397368 Neighboring gene dnaJ protein ERDJ2A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010365163 Unplaced Scaffold Reference ASM41409v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable WRKY transcription factor 27
Names
putative WRKY transcription factor 27

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Morus notabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41409v2

Genomic

  1. NW_010365163.1 Reference ASM41409v2

    Range
    235309..237022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010107428.2 → XP_010105730.1  probable WRKY transcription factor 27

    See identical proteins and their annotated locations for XP_010105730.1

    UniProtKB/TrEMBL
    W9SGS6
    Conserved Domains (1) summary
    smart00774
    Location:247 → 303
    WRKY; DNA binding domain
Nucleotide Protein
Heading Accession and Version

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