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LOC21393921 probable WRKY transcription factor 28 [ Morus notabilis ]

Gene ID: 21393921, updated on 21-Dec-2023

Summary

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Gene symbol
LOC21393921
Gene description
probable WRKY transcription factor 28
Locus tag
L484_010632
Gene type
protein coding
RefSeq status
MODEL
Organism
Morus notabilis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Moreae; Morus
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Genomic context

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See LOC21393921 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM41409v2 (GCF_000414095.1) Unplaced Scaffold NW_010362731.1 (75666..77603, complement)

NW_010362731.1Genomic Context describing neighboring genes Neighboring gene probable purine permease 10 Neighboring gene protein REDUCED WALL ACETYLATION 1 Neighboring gene two-pore potassium channel 3 Neighboring gene DNA-binding protein DDB_G0278111

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010362731 Unplaced Scaffold Reference ASM41409v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable WRKY transcription factor 28
Names
putative WRKY transcription factor 28

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Morus notabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41409v2

Genomic

  1. NW_010362731.1 Reference ASM41409v2

    Range
    75666..77603 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024168566.1 → XP_024024334.1  probable WRKY transcription factor 28

    Conserved Domains (1) summary
    pfam03106
    Location:201 → 256
    WRKY; WRKY DNA -binding domain
Nucleotide Protein
Heading Accession and Version

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