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LOC21393333 dual specificity protein phosphatase 1 [ Morus notabilis ]

Gene ID: 21393333, updated on 21-Dec-2023

Summary

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Gene symbol
LOC21393333
Gene description
dual specificity protein phosphatase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Morus notabilis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Moreae; Morus
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Genomic context

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See LOC21393333 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM41409v2 (GCF_000414095.1) Unplaced Scaffold NW_010363898.1 (711..2788)

NW_010363898.1Genomic Context describing neighboring genes Neighboring gene transcription factor MUTE Neighboring gene heavy metal-associated isoprenylated plant protein 32

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010363898 Unplaced Scaffold Reference ASM41409v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables MAP kinase tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of MAPK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dual specificity protein phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Morus notabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41409v2

Genomic

  1. NW_010363898.1 Reference ASM41409v2

    Range
    711..2788
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024170129.1 → XP_024025897.1  dual specificity protein phosphatase 1

    Conserved Domains (1) summary
    cd00127
    Location:31 → 166
    DSPc; Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or ...
Nucleotide Protein
Heading Accession and Version

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