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Bathy08g04640 hypothetical protein [ Bathycoccus prasinos ]

Gene ID: 19014443, updated on 16-Nov-2023

Summary

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Gene symbol
Bathy08g04640
Gene description
hypothetical protein
Locus tag
Bathy08g04640
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Bathycoccus prasinos (strain: RCC 1105)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus
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Genomic context

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See Bathy08g04640 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Sequence:
Chromosome: 8; NC_024001.1 (855254..857235)

Chromosome 8 - NC_024001.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene 40S ribosomal protein S17

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024001.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_024001.1 Reference assembly

    Range
    855254..857235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007511454.1 → XP_007511516.1  predicted protein [Bathycoccus prasinos]

    See identical proteins and their annotated locations for XP_007511516.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K8EHK1
    Conserved Domains (1) summary
    cl00033
    Location:40 → 154
    AP2; DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor ...
Nucleotide Protein
Heading Accession and Version

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