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LOC18994637 protein LHY [ Eutrema salsugineum ]

Gene ID: 18994637, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18994637
Gene description
protein LHY
Locus tag
EUTSA_v10007028mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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See LOC18994637 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256612.1 (15205559..15209730, complement)

NW_006256612.1Genomic Context describing neighboring genes Neighboring gene endoribonuclease Dicer homolog 1 Neighboring gene soluble inorganic pyrophosphatase 1 Neighboring gene WAT1-related protein At1g01070 Neighboring gene WAT1-related protein At1g11460

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256612 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein LHY

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256612.1 Reference Eutsalg1_0

    Range
    15205559..15209730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006418311.2 → XP_006418374.1  protein LHY

    See identical proteins and their annotated locations for XP_006418374.1

    UniProtKB/TrEMBL
    V4L368, V4MWJ1
    Conserved Domains (1) summary
    TIGR01557
    Location:22 → 72
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

  2. XM_006418312.2 → XP_006418375.1  protein LHY

    See identical proteins and their annotated locations for XP_006418375.1

    UniProtKB/TrEMBL
    V4L368, V4MWJ1
    Conserved Domains (1) summary
    TIGR01557
    Location:22 → 72
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

  3. XM_024152039.1 → XP_024007807.1  protein LHY

    UniProtKB/TrEMBL
    V4L368, V4MWJ1
    Conserved Domains (1) summary
    TIGR01557
    Location:22 → 72
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
Nucleotide Protein
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