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LOC18994117 telomere repeat-binding protein 5 [ Eutrema salsugineum ]

Gene ID: 18994117, updated on 3-Jun-2019

Summary

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Gene symbol
LOC18994117
Gene description
telomere repeat-binding protein 5
Locus tag
EUTSA_v10007062mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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See LOC18994117 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256612.1 (13267054..13270646)

NW_006256612.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510 Neighboring gene F-box protein SKIP19 Neighboring gene scarecrow-like protein 14 Neighboring gene scarecrow-like protein 31 Neighboring gene ATP-dependent zinc metalloprotease FTSH 10, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256612 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
telomere repeat-binding protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256612.1 Reference Eutsalg1_0

    Range
    13267054..13270646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006417731.2 → XP_006417794.1  telomere repeat-binding protein 5 isoform X1

    See identical proteins and their annotated locations for XP_006417794.1

    UniProtKB/TrEMBL
    V4L1H9
    Conserved Domains (2) summary
    smart00717
    Location:526 → 578
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cd11660
    Location:527 → 577
    SANT_TRF; Telomere repeat binding factor-like DNA-binding domains of the SANT/myb-like family

  2. XM_024152442.1 → XP_024008210.1  telomere repeat-binding protein 5 isoform X2

    Conserved Domains (1) summary
    cd11660
    Location:500 → 550
    SANT_TRF; Telomere repeat binding factor-like DNA-binding domains of the SANT/myb-like family
Nucleotide Protein
Heading Accession and Version

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