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LOC18993902 cell division cycle 5-like protein [ Eutrema salsugineum ]

Gene ID: 18993902, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18993902
Gene description
cell division cycle 5-like protein
Locus tag
EUTSA_v10006800mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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See LOC18993902 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256612.1 (12426378..12429821, complement)

NW_006256612.1Genomic Context describing neighboring genes Neighboring gene COBRA-like protein 6 Neighboring gene 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 Neighboring gene U2 small nuclear ribonucleoprotein A' Neighboring gene aspartyl protease AED3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256612 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Prp19 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell division cycle 5-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256612.1 Reference Eutsalg1_0

    Range
    12426378..12429821 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006417475.2 → XP_006417538.1  cell division cycle 5-like protein

    See identical proteins and their annotated locations for XP_006417538.1

    UniProtKB/TrEMBL
    V4MUY6
    Conserved Domains (4) summary
    smart00717
    Location:7 → 55
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cd11659
    Location:55 → 106
    SANT_CDC5_II; SANT/myb-like DNA-binding domain of Cell Division Cycle 5-Like Protein repeat II
    pfam11831
    Location:407 → 656
    Myb_Cef; pre-mRNA splicing factor component
    pfam13921
    Location:10 → 70
    Myb_DNA-bind_6; Myb-like DNA-binding domain
Nucleotide Protein
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