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LOC18993409 protein indeterminate-domain 6, chloroplastic [ Eutrema salsugineum ]

Gene ID: 18993409, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18993409
Gene description
protein indeterminate-domain 6, chloroplastic
Locus tag
EUTSA_v10007538mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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See LOC18993409 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256612.1 (10465924..10469132, complement)

NW_006256612.1Genomic Context describing neighboring genes Neighboring gene valine--tRNA ligase, mitochondrial 1 Neighboring gene putative Myb family transcription factor At1g14600 Neighboring gene plant UBX domain-containing protein 7 Neighboring gene mitochondrial carrier protein CoAc1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256612 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein indeterminate-domain 6, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256612.1 Reference Eutsalg1_0

    Range
    10465924..10469132 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006416934.2 → XP_006416997.1  protein indeterminate-domain 6, chloroplastic isoform X1

    See identical proteins and their annotated locations for XP_006416997.1

    UniProtKB/TrEMBL
    V4KCA7
    Conserved Domains (2) summary
    sd00017
    Location:83 → 103
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:186 → 202
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_024152621.1 → XP_024008389.1  protein indeterminate-domain 6, chloroplastic isoform X1

    UniProtKB/TrEMBL
    V4KCA7
    Conserved Domains (2) summary
    sd00017
    Location:83 → 103
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:186 → 202
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_024152622.1 → XP_024008390.1  protein indeterminate-domain 6, chloroplastic isoform X2

Nucleotide Protein
Heading Accession and Version

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