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LOC18793592 protein CRABS CLAW [ Prunus persica (peach) ]

Gene ID: 18793592, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18793592
Gene description
protein CRABS CLAW
Locus tag
PRUPE_1G290100
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC18793592 in Genome Data Viewer
Location:
chromosome: G1
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G1 NC_034009.1 (28896429..28898220)

Chromosome G1 - NC_034009.1Genomic Context describing neighboring genes Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene squamosa promoter-binding-like protein 6 Neighboring gene uncharacterized LOC109946616

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034009.1 Chromosome G1 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in floral meristem determinacy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leaf development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in style development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein CRABS CLAW

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034009.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    28896429..28898220
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007223937.2 → XP_007223999.2  protein CRABS CLAW isoform X2

    UniProtKB/TrEMBL
    A0A251R4X7
    Conserved Domains (1) summary
    pfam04690
    Location:15 → 158
    YABBY; YABBY protein

  2. XM_020555306.1 → XP_020410895.1  protein CRABS CLAW isoform X1

    UniProtKB/TrEMBL
    A0A251R4V9
    Conserved Domains (1) summary
    pfam04690
    Location:15 → 157
    YABBY; YABBY protein
Nucleotide Protein Strain
Heading Accession and Version

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