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LOC18791802 NAC domain-containing protein 104 [ Prunus persica (peach) ]

Gene ID: 18791802, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18791802
Gene description
NAC domain-containing protein 104
Locus tag
PRUPE_1G560100
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC18791802 in Genome Data Viewer
Location:
chromosome: G1
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G1 NC_034009.1 (45724232..45735338)

Chromosome G1 - NC_034009.1Genomic Context describing neighboring genes Neighboring gene mRNA decay activator protein ZFP36 Neighboring gene dynamin-like protein ARC5 Neighboring gene TMV resistance protein N Neighboring gene putative clathrin assembly protein At1g03050 Neighboring gene probable manganese-transporting ATPase PDR2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034009.1 Chromosome G1 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in system development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAC domain-containing protein 104

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034009.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    45724232..45735338
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007224232.2 → XP_007224294.1  NAC domain-containing protein 104 isoform X2

    See identical proteins and their annotated locations for XP_007224294.1

    UniProtKB/TrEMBL
    M5XV28
    Conserved Domains (1) summary
    pfam02365
    Location:11 → 52
    NAM; No apical meristem (NAM) protein

  2. XM_020566409.1 → XP_020421998.1  NAC domain-containing protein 104 isoform X1

    UniProtKB/TrEMBL
    A0A251RIQ0
    Conserved Domains (1) summary
    pfam02365
    Location:9 → 29
    NAM; No apical meristem (NAM) protein

  3. XM_020566404.1 → XP_020421993.1  NAC domain-containing protein 104 isoform X1

    UniProtKB/TrEMBL
    A0A251RIQ0
    Conserved Domains (1) summary
    pfam02365
    Location:9 → 29
    NAM; No apical meristem (NAM) protein
Nucleotide Protein Strain
Heading Accession and Version

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