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LOC18784367 probable WRKY transcription factor 45 [ Prunus persica (peach) ]

Gene ID: 18784367, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18784367
Gene description
probable WRKY transcription factor 45
Locus tag
PRUPE_3G308200
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC18784367 in Genome Data Viewer
Location:
chromosome: G3
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G3 NC_034011.1 (26854232..26856646, complement)

Chromosome G3 - NC_034011.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18782809 Neighboring gene squamosa promoter-binding-like protein 13A Neighboring gene 3-oxoacyl-[acyl-carrier-protein] reductase FabG Neighboring gene ABC transporter I family member 11, chloroplastic Neighboring gene protein LAZY 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034011.1 Chromosome G3 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable WRKY transcription factor 45

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034011.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    26854232..26856646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007216875.2 → XP_007216937.1  probable WRKY transcription factor 45

    See identical proteins and their annotated locations for XP_007216937.1

    UniProtKB/TrEMBL
    M5WY44
    Conserved Domains (1) summary
    smart00774
    Location:144 → 201
    WRKY; DNA binding domain
Nucleotide Protein Strain
Heading Accession and Version

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